From 8221ff9f13a706b6d959cea28afca3964c6ba421 Mon Sep 17 00:00:00 2001
From: Christian Boulanger <boulanger@lhlt.mpg.de>
Date: Tue, 23 Jul 2024 18:53:20 +0200
Subject: [PATCH] Add ontogpt Experiment

---
 footnotes/hoist-footnotes.ipynb | 52 ---------------------------------
 ontogpt/readme.md               |  6 ++++
 ontogpt/requirements.txt        |  1 +
 3 files changed, 7 insertions(+), 52 deletions(-)
 delete mode 100644 footnotes/hoist-footnotes.ipynb
 create mode 100644 ontogpt/readme.md
 create mode 100644 ontogpt/requirements.txt

diff --git a/footnotes/hoist-footnotes.ipynb b/footnotes/hoist-footnotes.ipynb
deleted file mode 100644
index 7ea7025..0000000
--- a/footnotes/hoist-footnotes.ipynb
+++ /dev/null
@@ -1,52 +0,0 @@
-{
- "cells": [
-  {
-   "metadata": {},
-   "cell_type": "markdown",
-   "source": "# Footnote-stuff",
-   "id": "8ac8a2c7825fd5b7"
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "id": "initial_id",
-   "metadata": {
-    "collapsed": true
-   },
-   "outputs": [],
-   "source": [
-    "text=\"\"\"\n",
-    "\n",
-    "\n",
-    "\"\"\""
-   ]
-  },
-  {
-   "metadata": {},
-   "cell_type": "markdown",
-   "source": "",
-   "id": "d01132e796e44507"
-  }
- ],
- "metadata": {
-  "kernelspec": {
-   "display_name": "Python 3",
-   "language": "python",
-   "name": "python3"
-  },
-  "language_info": {
-   "codemirror_mode": {
-    "name": "ipython",
-    "version": 2
-   },
-   "file_extension": ".py",
-   "mimetype": "text/x-python",
-   "name": "python",
-   "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython2",
-   "version": "2.7.6"
-  }
- },
- "nbformat": 4,
- "nbformat_minor": 5
-}
diff --git a/ontogpt/readme.md b/ontogpt/readme.md
new file mode 100644
index 0000000..a209b9e
--- /dev/null
+++ b/ontogpt/readme.md
@@ -0,0 +1,6 @@
+# OntoGPT experiment
+
+
+## Resources:
+- https://monarch-initiative.github.io/ontogpt/
+- https://incatools.github.io/ontology-access-kit/
\ No newline at end of file
diff --git a/ontogpt/requirements.txt b/ontogpt/requirements.txt
new file mode 100644
index 0000000..d2560e7
--- /dev/null
+++ b/ontogpt/requirements.txt
@@ -0,0 +1 @@
+ontogpt
\ No newline at end of file
-- 
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