Explore projects

A reanalysis of Pupko and Galtier's 2002 article on detecting rate shifts in Primate mitochondrial genomes.

An R6 class for location-scale regression models

This repository hosts the code and data for the analyses described in Tromp et al. (2020): OpenVirtualObjects: An open set of standardized and validated 3D household objects for virtual reality-based research, assessment, and therapy.

A container to deploy scClustViz applications for visualizing single-cell RNAseq clustering results from common analysis pipelines

R package providing a simple memory

A Docker container for i2dash development using RStudio.

Dockerfiles for important containers

Lab Rotation: Aug'19 - Oct '19

R packages with support functions to include existing images in rmd documents

R package to convert to ggplot2 objects

Data and scripts for:

The Evolution of Gene-Specific Transcriptional Noise Is Driven by Selection at the Pathway Level. Barroso GV, Puzovic N, Dutheil JY. Genetics. 2018 Jan;208(1):173-189. doi: 10.1534/genetics.117.300467.