Merge requests · loosolab

Resolve "Project / Analysis Stucture"

loosolab/software/sc_framework!200 · created Nov 22, 2023 by Rene Wiegandt dev
Discussion
- Merged
- Approved
updated Nov 30, 2023
Fix batch evaluation for small datasets via perplexity

loosolab/software/sc_framework!199 · created Nov 21, 2023 by Mette Bentsen Version 0.3 to main dev
Bug Feature request
- Merged
- Approved
updated Nov 28, 2023
Resolve "Readthedocs code examples II" 4 of 4 checklist items completed

loosolab/software/sc_framework!197 · created Nov 20, 2023 by Mette Bentsen dev
Feature request
updated Apr 04, 2024
changed typing to beartype.typing

loosolab/software/sc_framework!196 · created Nov 17, 2023 by Jan Detleffsen Version 0.3 to main dev
- Merged
- Approved
updated Nov 20, 2023
fix hardcoded embedding coordinates

loosolab/software/sc_framework!195 · created Nov 15, 2023 by Yousef Alayoubi dev
Bug
- Merged
- 2
- Approved
updated Nov 20, 2023
Resolve "Marker Repo integration"

loosolab/software/sc_framework!194 · created Nov 13, 2023 by Micha-Frederick Kessler dev
Celltype annotation Feature request
- Merged
- 7
- Approved
updated Feb 20, 2024
Draft: Resolve "prepare_for_cellxgene colormap parameter"

loosolab/software/sc_framework!193 · created Nov 09, 2023 by Hendrik Schultheis Version 0.3 to main dev
Feature request
- Closed
- 1
updated Nov 20, 2023
Resolve "PCA correlation plot with NaN values"

loosolab/software/sc_framework!192 · created Nov 08, 2023 by Yousef Alayoubi dev
Bug Feature request
- Merged
- 4
- Approved
updated Nov 13, 2023
Update .gitlab-ci.yml file build job rules

loosolab/software/sc_framework!191 · created Nov 07, 2023 by Jan Detleffsen dev
CI/CD
- Merged
- Approved
updated Nov 07, 2023
Resolve "scatterplot overplotting"

loosolab/software/sc_framework!190 · created Nov 03, 2023 by Mette Bentsen Version 0.3 to main dev
Feature request
- Merged
- 3
- Approved
updated Nov 13, 2023
Dev

loosolab/software/scRNAseq.preprocessing!26 · created Nov 02, 2023 by Hendrik Schultheis
- Merged
updated Nov 02, 2023
Resolve "sctoolbox.plotting.marker_genes.gene_expression_heatmap"

loosolab/software/sc_framework!188 · created Nov 02, 2023 by Mette Bentsen dev
RNA
- Merged
- 5
- Approved
updated Nov 20, 2023
Resolve "sctoolbox.tools.marker_genes.get_rank_genes_tables - top x genes parameter"

loosolab/software/sc_framework!187 · created Nov 02, 2023 by Mette Bentsen dev
Feature request
- Merged
- 5
- Approved
updated Nov 06, 2023
Internal fragment file creation

loosolab/software/sc_framework!186 · created Nov 01, 2023 by Mette Bentsen dev
- Merged
- 4
- Approved
updated Nov 06, 2023
Dev

loosolab/software/scRNAseq.preprocessing!25 · created Nov 01, 2023 by Hendrik Schultheis
- Merged
updated Nov 01, 2023
Hotfix

loosolab/software/scRNAseq.preprocessing!24 · created Nov 01, 2023 by Hendrik Schultheis dev
- Merged
updated Nov 01, 2023
Initial Codebase for MarkerRepo

loosolab/software/annotate_by_marker_and_features!45 · created Oct 24, 2023 by Micha-Frederick Kessler
- Merged
updated Oct 24, 2023
Refactoring

loosolab/software/annotate_by_marker_and_features!44 · created Oct 24, 2023 by Micha-Frederick Kessler dev
- Merged
updated Oct 24, 2023
Update 6 files

loosolab/software/metadata_whitelists!28 · created Oct 23, 2023 by Jasmin Walter add_strain
- Merged
updated Oct 23, 2023
Unstabel

loosolab/software/loosolab-s3!13 · created Sep 26, 2023 by Philipp Goymann
- Merged
updated Sep 26, 2023