Merge requests · loosolab

add editing type

loosolab/software/metadata_whitelists!13 · created May 22, 2023 by Jasmin Walter update_factors
- Merged
updated May 22, 2023
Update project setup

loosolab/software/sc_framework!127 · created May 16, 2023 by Rene Wiegandt dev
- Merged
- Approved
updated May 17, 2023
add knockdown method

loosolab/software/metadata_whitelists!12 · created May 17, 2023 by Jasmin Walter
- Merged
updated May 17, 2023
Improvements to plotting functions, bug fixes etc.

loosolab/software/sc_framework!118 · created Apr 19, 2023 by Mette Bentsen refactor
- Merged
updated May 16, 2023
Deploy one environment per branch

loosolab/software/sc_framework!126 · created May 15, 2023 by Mette Bentsen dev
- Merged
updated May 15, 2023
Resolve "Integrate global output path into sctoolbox"

loosolab/software/sc_framework!114 · created Mar 31, 2023 by Mette Bentsen Notebook analysis output structure (+ internal adata location) dev
- Merged
- 9
updated May 15, 2023
add abbreviation for units

loosolab/software/metadata_whitelists!11 · created May 15, 2023 by Jasmin Walter
- Merged
updated May 15, 2023
Settings integration ATAC

loosolab/software/sc_framework!125 · created May 15, 2023 by Jan Detleffsen 89-integrate-global-output-path-into-sctoolbox
ATAC
updated May 15, 2023
Resolve "SCSA annotation stops with Error"

loosolab/software/sc_framework!124 · created May 09, 2023 by Rene Wiegandt dev
ATAC Bug
- Merged
- Approved
updated May 15, 2023
implement function to calculate cell cycle scores

loosolab/software/sc_framework!109 · created Mar 20, 2023 by Yousef Alayoubi Initial version 0.1 to main dev
RNA
- Merged
- 26
- Approved
updated May 12, 2023
add function to score cells based on a list of genes

loosolab/software/sc_framework!106 · created Mar 14, 2023 by Yousef Alayoubi Initial version 0.1 to main dev
RNA
- Merged
- 19
- Approved
updated May 12, 2023
Functions for bam to bigwig

loosolab/software/sc_framework!81 · created Nov 17, 2022 by Mette Bentsen dev
- Merged
- 2
- Approved
updated May 09, 2023
Init tests of nucleosomal scoring

loosolab/software/sc_framework!122 · created May 04, 2023 by Jan Detleffsen Initial version 0.1 to main dev
ATAC
- Merged
- Approved
updated May 05, 2023
Pages per branch

loosolab/software/sc_framework!121 · created May 04, 2023 by Mette Bentsen dev
- Merged
updated May 04, 2023
Treatment

loosolab/software/metadata_whitelists!10 · created May 03, 2023 by Jasmin Walter
- Merged
updated May 03, 2023
Unstabel

loosolab/software/loosolab-s3!6 · created May 01, 2023 by Philipp Goymann
- Merged
- Approved
updated May 01, 2023
Unstabel

loosolab/software/loosolab-s3!5 · created May 01, 2023 by Philipp Goymann
- Merged
updated May 01, 2023
nucleosomal_score and additional features and fixes

loosolab/software/sc_framework!112 · created Mar 30, 2023 by Jan Detleffsen dev
- Merged
- 4
- Approved
updated Apr 28, 2023
rm fraction

loosolab/software/metadata_whitelists!9 · created Apr 27, 2023 by Jasmin Walter
- Merged
updated Apr 27, 2023
add fraction

loosolab/software/metadata_whitelists!8 · created Apr 25, 2023 by Jasmin Walter
- Merged
updated Apr 27, 2023