Merge requests · loosolab

Predict sex fix

loosolab/software/sc_framework!82 · created Nov 23, 2022 by Rene Wiegandt dev
- Merged
- 7
- Approved
updated Nov 25, 2022
add notebook execution restricted to gwdg-shared runner

loosolab/software/sc_framework!85 · created Nov 24, 2022 by Vanessa Heger
updated Nov 24, 2022
added tags for lint, test_coverage, pages

loosolab/software/sc_framework!84 · created Nov 24, 2022 by Vanessa Heger dev
- Merged
- Approved
updated Nov 24, 2022
Update main

loosolab/software/sc_framework!83 · created Nov 23, 2022 by Rene Wiegandt dev
- Merged
- Approved
updated Nov 23, 2022
if a new debian 11 vm is installed from scratch with jupyter role, there is a package missing.

loosolab/software/sc_framework!79 · created Nov 10, 2022 by Carsten Kuenne
updated Nov 10, 2022
Fixing variable definition

loosolab/software/sc_framework!77 · created Nov 09, 2022 by guilherme.valente
- Merged
- Approved
updated Nov 09, 2022
mamba as the default environment installer

loosolab/software/sc_framework!74 · created Nov 08, 2022 by Mette Bentsen
- Merged
updated Nov 08, 2022
Add explanation of how to access notebooks

loosolab/software/sc_framework!73 · created Nov 08, 2022 by Mette Bentsen
- Merged
updated Nov 08, 2022
Dir tree integration

loosolab/software/sc_framework!65 · created Oct 31, 2022 by Jan Detleffsen dev
updated Nov 01, 2022
Code for counting insertsize/fragmentsize from scATAC

loosolab/software/sc_framework!60 · created Oct 27, 2022 by Mette Bentsen dev
- Merged
- Approved
updated Nov 01, 2022
Hackathon release

loosolab/software/sc_framework!62 · created Oct 31, 2022 by Hendrik Schultheis
updated Oct 31, 2022
Error building mnnpy for notebook testing

loosolab/software/sc_framework!70 · created Oct 31, 2022 by Mette Bentsen dev
- Merged
updated Oct 31, 2022
force creation of env using mamba

loosolab/software/sc_framework!69 · created Oct 31, 2022 by Mette Bentsen dev
- Merged
updated Oct 31, 2022
prevent creation of virtual env for notebook test

loosolab/software/sc_framework!68 · created Oct 31, 2022 by Mette Bentsen dev
- Merged
updated Oct 31, 2022
Make sure conda is available for testing

loosolab/software/sc_framework!67 · created Oct 31, 2022 by Mette Bentsen dev
- Merged
updated Oct 31, 2022
Added sctoolbox kernel before testing notebooks

loosolab/software/sc_framework!66 · created Oct 31, 2022 by Mette Bentsen dev
- Merged
updated Oct 31, 2022
missing nbconvert for running notebooks

loosolab/software/sc_framework!64 · created Oct 31, 2022 by Mette Bentsen dev
- Merged
updated Oct 31, 2022
Add tests for incoming merge requests

loosolab/software/sc_framework!63 · created Oct 31, 2022 by Mette Bentsen dev
- Merged
updated Oct 31, 2022
Added test for notebooks for pushing to main

loosolab/software/sc_framework!61 · created Oct 31, 2022 by Mette Bentsen dev
- Merged
- Approved
updated Oct 31, 2022
Addition of 3D UMAP plot

loosolab/software/sc_framework!37 · created Jul 18, 2022 by Mette Bentsen dev
- Merged
updated Oct 31, 2022