Merge requests · loosolab

Update README.md

loosolab/container/r-splicing!1 · created Jul 11, 2022 by Mario Looso
- Merged
updated Jul 11, 2022
Fixing save figures in notebook 2

loosolab/software/sc_framework!15 · created Jun 28, 2022 by guilherme.valente dev
- Merged
- 4
updated Jul 05, 2022
Call packages note 2

loosolab/software/sc_framework!25 · created Jul 04, 2022 by guilherme.valente dev
- Merged
- 27
- Approved
updated Jul 05, 2022
Modification to call the 10X assembler in the notebook

loosolab/software/sc_framework!28 · created Jul 04, 2022 by guilherme.valente dev
- Merged
- 1
- Approved
updated Jul 04, 2022
Split check_infoyml() into two functions and added tests for both.

loosolab/software/sc_framework!19 · created Jun 29, 2022 by Rene Wiegandt dev
- Merged
- 2
updated Jul 04, 2022
Fix errors implemented in prior merge request !19

loosolab/software/sc_framework!29 · created Jul 04, 2022 by Rene Wiegandt dev
- Merged
- 3
- Approved
updated Jul 04, 2022
Redesign build_infor; Added test for build_infor

loosolab/software/sc_framework!22 · created Jun 30, 2022 by Rene Wiegandt dev
- Merged
- Approved
updated Jul 01, 2022
Update .gitlab-ci.yml file

loosolab/software/sc_framework!24 · created Jul 01, 2022 by guilherme.valente dev
- Merged
- Approved
updated Jul 01, 2022
Feature jan

loosolab/software/sc_framework!18 · created Jun 29, 2022 by Jan Detleffsen dev
- Merged
- Approved
updated Jul 01, 2022
Update setup.py

loosolab/software/sc_framework!17 · created Jun 29, 2022 by Sweta Talyan dev
- Merged
- Approved
updated Jun 29, 2022
Addition of plotting and scatac functionalities

loosolab/software/sc_framework!12 · created Jun 22, 2022 by Mette Bentsen dev
- Merged
- 23
- Approved
updated Jun 27, 2022
Fixing readme

loosolab/software/sc_framework!14 · created Jun 27, 2022 by guilherme.valente dev
- Merged
- Approved
updated Jun 27, 2022
Fixed def cutoff calc

loosolab/software/sc_framework!11 · created Jun 21, 2022 by guilherme.valente dev
- Merged
- Approved
updated Jun 27, 2022
Update README.md

loosolab/container/R_snapatac!12 · created May 17, 2022 by Jan Detleffsen
- Merged
updated May 17, 2022
Utility functions for marker gene and pseudobulk analysis (not related to filtering)

loosolab/software/sc_framework!8 · created Apr 24, 2022 by Mette Bentsen dev
- Merged
updated Apr 25, 2022
Filter functions related to #4

loosolab/software/sc_framework!9 · created Apr 25, 2022 by Mette Bentsen dev
- Merged
- 1
- Approved
updated Apr 25, 2022
Update assembly notebook

loosolab/software/sc_framework!6 · created Apr 04, 2022 by Hendrik Schultheis dev
- Merged
- Approved
updated Apr 20, 2022
Added from_mtx and from_single_mtx function

loosolab/software/sc_framework!7 · created Apr 05, 2022 by Rene Wiegandt dev
- Merged
- Approved
updated Apr 20, 2022
Fix scanpy import error

loosolab/software/scRNAseq.preprocessing!14 · created Apr 14, 2022 by Hendrik Schultheis
- Merged
- Approved
updated Apr 14, 2022
fixed: anndata.write() hdf5 file: int() argument must be a string, a bytes-like object or a number

loosolab/software/scRNAseq.preprocessing!13 · created Apr 12, 2022 by Hendrik Schultheis
- Merged
updated Apr 12, 2022