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HoloTomoToolbox
Commits
d615ef9f
Commit
d615ef9f
authored
Oct 15, 2019
by
Anna Lena R
Browse files
deleted changes-cropping is done in alignImages
parent
edc5f267
Pipeline
#111359
passed with stage
in 1 minute and 15 seconds
Changes
1
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
functions/phaseRetrieval/utilities/rescaleDefocusSeries.m
View file @
d615ef9f
...
...
@@ -290,13 +290,7 @@ for imageIdx = idxMaxMagnification+direction:direction:idxMaxMagnification+direc
imFiltered
=
imScaled
;
else
% align the cropped image to the reference using alignImages and dftregistration
[
~
,
shifts
,
rotAngleDegree
,
imFiltered
]
=
alignImages
(
imScaled
(
...
settings
.
cutTop
+
1
:
size
(
imScaled
,
1
)
-
settings
.
cutBottom
...
,
settings
.
cutLeft
+
1
:
size
(
imScaled
,
2
)
-
settings
.
cutRight
)
...
,
imReference
(
...
settings
.
cutTop
+
1
:
size
(
imReference
,
1
)
-
settings
.
cutBottom
...
,
settings
.
cutLeft
+
1
:
size
(
imReference
,
2
)
-
settings
.
cutRight
)
...
,
settings
);
[
~
,
shifts
,
rotAngleDegree
,
imFiltered
]
=
alignImages
(
imScaled
,
imReference
,
settings
);
end
% Apply scaling and registered shifts/rotations to original image (performed in a single step
...
...
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