Commit d615ef9f authored by Anna Lena R's avatar Anna Lena R
Browse files

deleted changes-cropping is done in alignImages

parent edc5f267
Pipeline #111359 passed with stage
in 1 minute and 15 seconds
...@@ -290,13 +290,7 @@ for imageIdx = idxMaxMagnification+direction:direction:idxMaxMagnification+direc ...@@ -290,13 +290,7 @@ for imageIdx = idxMaxMagnification+direction:direction:idxMaxMagnification+direc
imFiltered = imScaled; imFiltered = imScaled;
else else
% align the cropped image to the reference using alignImages and dftregistration % align the cropped image to the reference using alignImages and dftregistration
[~, shifts, rotAngleDegree, imFiltered] = alignImages(imScaled(... [~, shifts, rotAngleDegree, imFiltered] = alignImages(imScaled, imReference ,settings);
settings.cutTop + 1: size(imScaled,1)-settings.cutBottom ...
, settings.cutLeft + 1 : size(imScaled,2)-settings.cutRight) ...
, imReference(...
settings.cutTop + 1 : size(imReference,1)-settings.cutBottom ...
, settings.cutLeft + 1 : size(imReference,2)-settings.cutRight) ...
,settings);
end end
% Apply scaling and registered shifts/rotations to original image (performed in a single step % Apply scaling and registered shifts/rotations to original image (performed in a single step
......
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