response body can only be used once and other fixes

.gitignore

@@ -22,7 +22,8 @@
 !graphdb.gwdg.de.pem
 !sensor_type_info.json
 !sensor_info/**/*
-
+!develogging.properties
+!devel_sensor2graph.properties
 
 
 

build.gradle

@@ -15,6 +15,9 @@ dependencies {
     implementation 'com.squareup.okhttp3:okhttp:4.9.1'
 }
 
+compileJava {
+    options.compilerArgs << "-Xlint:deprecation"
+}
 
 mainClassName = 'sensor2graph.Main'
 

devel_sensor2graph.properties

+neo4j_uri=bolt://localhost:7687
+database_name=neo4j
+already_uploaded_days_file = all_days.txt
+failed_to_upload_sensors_file = test_sensor.txt
\ No newline at end of file

develogging.properties

+# custom logging properties file based on default logging config file
+
+############################################################
+#  	Default Logging Configuration File
+#
+# You can use a different file by specifying a filename
+# with the java.util.logging.config.file system property.  
+# For example java -Djava.util.logging.config.file=myfile
+############################################################
+
+############################################################
+#  	Global properties
+############################################################
+
+# "handlers" specifies a comma separated list of log Handler 
+# classes.  These handlers will be installed during VM startup.
+# Note that these classes must be on the system classpath.
+# By default we only configure a ConsoleHandler, which will only
+# show messages at the INFO and above levels.
+handlers=
+
+# To also add the FileHandler, use the following line instead.
+#handlers= java.util.logging.FileHandler, java.util.logging.ConsoleHandler
+
+# Default global logging level.
+# This specifies which kinds of events are logged across
+# all loggers.  For any given facility this global level
+# can be overriden by a facility specific level
+# Note that the ConsoleHandler also has a separate level
+# setting to limit messages printed to the console.
+.level= ALL
+
+############################################################
+# Handler specific properties.
+# Describes specific configuration info for Handlers.
+############################################################
+
+# default file output is in user's home directory.
+java.util.logging.FileHandler.pattern = logs/sensor%g_%u.log
+java.util.logging.FileHandler.limit = 0
+java.util.logging.FileHandler.count = 10
+# Default number of locks FileHandler can obtain synchronously.
+# This specifies maximum number of attempts to obtain lock file by FileHandler
+# implemented by incrementing the unique field %u as per FileHandler API documentation.
+java.util.logging.FileHandler.maxLocks = 100
+java.util.logging.FileHandler.formatter = java.util.logging.SimpleFormatter
+
+# Limit the message that are printed on the console to INFO and above.
+java.util.logging.ConsoleHandler.level = INFO
+java.util.logging.ConsoleHandler.formatter = java.util.logging.SimpleFormatter
+
+# Example to customize the SimpleFormatter output format 
+# to print one-line log message like this:
+#     <level>: <log message> [<date/time>]
+#
+# java.util.logging.SimpleFormatter.format=%4$s: %5$s [%1$tc]%n
+
+############################################################
+# Facility specific properties.
+# Provides extra control for each logger.
+############################################################
+
+# For example, set the com.xyz.foo logger to only log SEVERE
+# messages:
+# com.xyz.foo.level = SEVERE
+
+sensor2graph.Main.level = FINE
+sensor2graph.Main.handlers = java.util.logging.ConsoleHandler, java.util.logging.FileHandler
+
+global.level = FINE
+global.handlers = java.util.logging.FileHandler

src/main/java/sensor2graph/Main.java

@@ -79,8 +79,8 @@ public class Main {
 
 	private static void run() throws Exception {
 		try_uploading_failed_sensors();
-		upload_all_days();
-		try_uploading_failed_sensors();
+		// upload_all_days();
+		// try_uploading_failed_sensors();
 	}
 
 
@@ -170,7 +170,7 @@ public class Main {
 			Handle.http_client = Handle.get_client();
 			test_auth();
 			pre_run_graphdb_actions();
-			//run();
+			run();
 		} catch (org.neo4j.driver.exceptions.AuthenticationException e) {
 			Main.logger.log(Level.SEVERE, "Authentication failed, are your credentials correct?");
 		} catch (Exception e) {

src/main/java/sensor2graph/Sensor.java

@@ -104,22 +104,22 @@ class Sensor {
 
 		Request request = new Request.Builder()
 			.url(Main.pid_registry_uri + target_uri)
-			.method(method, RequestBody.create(MediaType.parse("application/json"), body.toString()))
+			.method(method, RequestBody.create(body.toString(), MediaType.parse("application/json")))
 			.header("Accept", "application/json")
 			.header("Content-Type", "application/json")
 			.header("Authorization", "Handle clientCert=\"true\"")
 			.build();
 
 		try (Response response = Handle.http_client.newCall(request).execute()) {
-			System.out.println(response.body().string() + response.code());
+			var response_body = response.body().string();
 			Main.glogger.fine("status: " + response.code());
-			Main.glogger.fine("resp: " + response.body().string());
+			Main.glogger.fine("resp: " + response_body);
 
 			if (response.code() / 100 != 2) {
-				throw new Exception("request to pid registry failed with status code " + response.code() + ", reponse: " + response.body().string());
+				throw new Exception("request to pid registry failed with status code " + response.code() + ", reponse: " + response_body);
 			}
 	
-			return response.body().string();
+			return response_body;
 		}
 	}
 
@@ -170,7 +170,7 @@ class Sensor {
 			
 			"with s, type.sensor_type as sensor_type, type.manufacturer as manufacturer, type.description as description\n" +
 			"match (s)--(all_measurements:MeasurementLocation)" +
-			"return s.pid, id(s), sensor_type, manufacturer, description min(all_measurements.first_msg), max(all_measurements.last_msg)"
+			"return s.pid, id(s), sensor_type, manufacturer, description, min(all_measurements.first_msg), max(all_measurements.last_msg)"
 		).withParameters(properties);
 	}