This project is mirrored from https://github.com/chanzuckerberg/cellxgene.git. Pull mirroring updated .
  1. 10 Jul, 2020 3 commits
  2. 07 Jul, 2020 3 commits
  3. 01 Jul, 2020 2 commits
  4. 30 Jun, 2020 1 commit
  5. 29 Jun, 2020 1 commit
  6. 26 Jun, 2020 2 commits
  7. 25 Jun, 2020 2 commits
  8. 24 Jun, 2020 2 commits
    • Timmy Huang's avatar
      1510-smoke-test (#1548) · 83376627
      Timmy Huang authored
      * 1510-smoke-test
      
      * config default
      
      * update tests
      
      * update test config
      
      * fix linter errors
      
      * more comments
      
      * address comments
      
      * use npm install in push_tests.yml
      
      * use environment.default.json
      
      * adding docs
      
      * Take care of @mweiden's nits
      
      * Save screenshots in the __tests__/screenshots/ directory
      
      * typo
      
      * docs
      
      * Add chart tests (#1580)
      
      * merge tests
      
      * check if bin creation returned null before rendering charts (#1576)
      
      * check if bin creation returned null before rendering charts
      
      * refactor chart rendering into functions (#1577)
      
      * little fixes from PR
      
      * reintroduce fix to check for null values
      
      * change getAllByClass to return element
      
      * slice instead
      
      * new stackedbar test
      
      * feedback-1573-test (#1579)
      
      * feedback-1573-test
      
      * enable whole test set
      
      * revert tests
      Co-authored-by: default avatarTimmy Huang <tihuan@users.noreply.github.com>
      
      * tweak test to actually render chart
      
      * include snapshot
      
      * remove async
      
      * fix getAllHistograms
      
      * properly grab id
      Co-authored-by: default avatarTimmy Huang <tihuan@users.noreply.github.com>
      Co-authored-by: default avatarMatt Weiden <538456+mweiden@users.noreply.github.com>
      Co-authored-by: default avatarSeveriano Badajoz <sbadajoz@chanzuckerberg.com>
      83376627
    • bmccandless's avatar
      Return 404 when the dataset does not exist (#1581) · e22e671f
      bmccandless authored
      Also in this PR, restructure the exception handling.
      
      fixes #1566
      e22e671f
  9. 23 Jun, 2020 1 commit
  10. 16 Jun, 2020 2 commits
    • Severiano Badajoz's avatar
      Fix Truncation styling issues (#1558) · 0e28df0b
      Severiano Badajoz authored
      * fix color inheritance
      
      * tweak width constants
      
      * update snapshot
      
      * Trigger workflow
      0e28df0b
    • Donald Paul Herman's avatar
      Improve Lasso 'will close' visual feedback. (#1550) · d6a96e9c
      Donald Paul Herman authored
      * Decreased the scope of polygonToPath and distance variables.  Added a
      new variable for the lasso path color.  Removed the color setting from
      handleDragStart, since this is already set in handleDrag.  Added a
      closePathColor "#bb2f00" which is the complementary of lasso path color.
      When a lasso can close, the color will change from blue to red.
      
      * Fix some linter issues.
      
      * Fixed some linter issues.
      
      * Fixing some linter issues.
      
      * Changed lasso open and closed to BLUE5 and GREEN5 respectively.
      d6a96e9c
  11. 15 Jun, 2020 1 commit
    • Severiano Badajoz's avatar
      Componentize bar charts (#1557) · 23619010
      Severiano Badajoz authored
      * create miniHistogram Component
      
      * use MiniHistogram
      
      * create MiniStackedBar Component
      
      * Use MiniStackedBar
      
      * update graphs on colorAccessor change
      
      * Move bin creation out of miniHistogram
      
      * rename expressionLabel
      
      * breakout stackedbar bin creation
      
      * Trigger workflow
      
      * move components to individual folders
      
      * rename constant
      23619010
  12. 11 Jun, 2020 1 commit
  13. 10 Jun, 2020 2 commits
    • mattcai's avatar
      minor typo fix (#1553) · d6c606b7
      mattcai authored
      d6c606b7
    • Bruce Martin's avatar
      refactor categorical controls state (#1549) · bc7a7120
      Bruce Martin authored
      * refactor categorical controls state
      
      * lint
      
      * fix race condition in tests
      
      * fix typo
      
      * add missing update on subset
      
      * remove obsolete code
      
      * update jest and puppeteer major version; update all minors
      
      * update when label changes
      
      * remove lint from tests; increase timeouts in e2e tests
      
      * changes in response to PR review
      
      * lint
      
      * more PR comment changes
      
      * more PR comment fixes
      
      * lint
      
      * more PR comment resolutions
      bc7a7120
  14. 09 Jun, 2020 1 commit
  15. 05 Jun, 2020 2 commits
    • Severiano Badajoz's avatar
      Create Truncation Component (#1500) · 4e968470
      Severiano Badajoz authored
      * remove ESLint rules
      
      operator-linebreak is no different then default
      quotes is overwriting prettier config
      
      * add string-pixel-width dep
      
      * don't lint-staged src, only staged
      
      * add widthMap
      
      * create Truncate component
      
      * refactor in truncate component
      
      * add font load checking
      
      * remove font-family styling
      
      * render Truncate's child instead of creating own component to render
      
      * refactor to use Truncate component
      
      * add span back
      
      * support children
      
      * remove maybeTruncateString
      
      * sub in Truncate component
      
      * add bold prop
      
      * accurately compute largest possible string
      
      * remove logs
      
      * tweak truncation method
      
      * memoize comp function
      
      * explain disable
      
      * fix bugs w/ abs/floor
      
      * tweak widths
      
      * tweak widths
      
      * fix font size
      
      * remove border
      
      * move test-id
      
      * attempt css solution
      
      * Revert "attempt css solution"
      
      This reverts commit aac4d8a6.
      
      * CSS solution v2
      
      * remove string-pixel-width
      
      * remove widthsMap
      
      * remove dead code
      
      * remove "data-truncated" as it is always true
      
      * tweak label width
      
      * fix e2e tests
      
      * remove testing string
      
      * e2e annotations tweaks
      
      * correct snapshot
      
      * remove resolves
      
      * check for labels
      
      * add test-id
      
      * format fix
      
      * update snapshot
      
      * fix color
      
      * pull constants out where available
      4e968470
    • bmccandless's avatar
      99d004d1
  16. 04 Jun, 2020 1 commit
  17. 03 Jun, 2020 1 commit
  18. 02 Jun, 2020 2 commits
    • Bruce Martin's avatar
      initial bug fixes and test improvements for the matrix refactor (#1503) · 2ba4944f
      Bruce Martin authored
      * initial bug fixes and test improvements for the matrix refactor
      
      * lint
      2ba4944f
    • bmccandless's avatar
      sparse column shift encoding. (#1502) · 76523d4f
      bmccandless authored
      
      Many of our matrices are log normalized, which tends to eliminate
      the number of non zero values (if there were any).  This prevents
      the matrix from being stored as a sparse matrix.  The solution here
      is to use a simple transformation to make it sparse again.  The most
      common value from each column is subtracted from that column.  These
      values that were subtracted are saved in an array called X_col_shift.
      
      The cellxgene code needs to understand how to undo the transformation when
      operating over the X matrix.
      
      - added script to create a synthetic dataset for testing
      - added a script to convert an existing CXG dataset to a sparse CXG dataset
      76523d4f
  19. 29 May, 2020 2 commits
  20. 26 May, 2020 3 commits
  21. 21 May, 2020 3 commits
  22. 20 May, 2020 2 commits