Commit c7c1ee0e authored by aditya.bhagwat's avatar aditya.bhagwat
Browse files

Small CHECK Fixes

parent 57c4bc4d
Pipeline #154354 passed with stages
in 18 seconds
......@@ -132,7 +132,7 @@ add_nickspacers <- function(primespacers, bsgenome,
plot = TRUE, verbose = TRUE
){
# Check / Initialize
. <- crisprname <- crisprspacer <- crisprpam <- NULL
. <- crisprname <- crisprspacer <- crisprpam <- nickoff <- NULL
off0 <- off1 <- off2 <- pename <- off <- NULL
primespacers$pename <- primespacers$crisprname
primespacers$type <- 'pespacer'
......
......@@ -516,6 +516,7 @@ count_spacer_matches <- function(
#' @param outdir bowtie output directory
#' @param verbose TRUE (default) or FALSE
#' @examples
#' require(magrittr)
#' file <- system.file('extdata/SRF.bed', package='multicrispr')
#' bsgenome <- BSgenome.Mmusculus.UCSC.mm10::BSgenome.Mmusculus.UCSC.mm10
#' targets0 <- bed_to_granges(file, 'mm10')
......
......@@ -33,6 +33,7 @@ add_target_matches(
Add target matches
}
\examples{
require(magrittr)
file <- system.file('extdata/SRF.bed', package='multicrispr')
bsgenome <- BSgenome.Mmusculus.UCSC.mm10::BSgenome.Mmusculus.UCSC.mm10
targets0 <- bed_to_granges(file, 'mm10')
......
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