Commit cbf12adb authored by aditya.bhagwat's avatar aditya.bhagwat
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Reran pkgdown::build_site()

parent 1169e035
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Package: multicrispr
Title: Multi-locus multi-purpose Crispr/Cas design
Version: 0.99.26
Version: 0.99.27
Authors@R: c(person("Aditya", "Bhagwat", NULL, "aditya.bhagwat@mpi-bn.mpg.de", c("aut", "cre")),
person( "Johannes", "Graumann", NULL, 'johannes.graumann@mpi-bn.mpg.de',c("sad", "ctb")),
person( "Mette", "Bentsen", NULL, "mette.bentsen@mpi-bn.mpg.de", "ctb"),
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......@@ -3,7 +3,6 @@
[![](https://bioconductor.org/shields/build/devel/bioc/multicrispr.svg)](http://bioconductor.org/checkResults/devel/bioc-LATEST/multicrispr/)
[![](https://bioconductor.org/shields/availability/3.12/multicrispr.svg)](https://bioconductor.org/packages/devel/bioc/html/multicrispr.html#archives)
[![](https://bioconductor.org/shields/years-in-bioc/multicrispr.svg)](https://bioconductor.org/packages/devel/bioc/html/multicrispr.html#since)
[![](https://img.shields.io/badge/doi-10.26508/lsa.202000757-blue.svg)](https://doi.org/10.26508/lsa.202000757)
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......@@ -71,7 +71,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -31,7 +31,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......@@ -81,7 +81,7 @@
<h1 data-toc-skip>Crispr/Cas9 gRNA design</h1>
<h4 class="author">Aditya M Bhagwat</h4>
<h4 class="date">2020-09-06</h4>
<h4 class="date">2020-09-10</h4>
<div class="hidden name"><code>crispr_grna_design.Rmd</code></div>
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......@@ -31,7 +31,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......@@ -81,7 +81,7 @@
<h1 data-toc-skip>Genome arithmetics</h1>
<h4 class="author">Aditya M Bhagwat</h4>
<h4 class="date">2020-09-06</h4>
<h4 class="date">2020-09-10</h4>
<div class="hidden name"><code>genome_arithmetics.Rmd</code></div>
......
......@@ -71,7 +71,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -31,7 +31,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......@@ -81,7 +81,7 @@
<h1 data-toc-skip>Prime Editing</h1>
<h4 class="author">Aditya M Bhagwat</h4>
<h4 class="date">2020-09-06</h4>
<h4 class="date">2020-09-10</h4>
<div class="hidden name"><code>prime_editing.Rmd</code></div>
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......@@ -6,7 +6,7 @@
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Authors • multicrispr</title>
<title>Citation and Authors • multicrispr</title>
<!-- jquery -->
......@@ -39,7 +39,7 @@
<meta property="og:title" content="Authors" />
<meta property="og:title" content="Citation and Authors" />
......@@ -58,7 +58,7 @@
</head>
<body data-spy="scroll" data-target="#toc">
<div class="container template-authors">
<div class="container template-citation-authors">
<header>
<div class="navbar navbar-default navbar-fixed-top" role="navigation">
<div class="container">
......@@ -71,7 +71,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......@@ -119,6 +119,27 @@
<div class="row">
<div class="contents col-md-9">
<div class="page-header">
<h1>Citation</h1>
</div>
<p>M AB, Graumann J, Wiegandt R, Bentsen M, Welker J, Welker J, Cuenne K, Preussner J, Braun T, Looso M (2020).
&ldquo;multicrispr: gRNA design for prime editing and parallel targeting of thousands of targets.&rdquo;
<em>Life Science Alliance</em>, <b>3</b>(11).
doi: <a href="https://doi.org/10.26508/lsa.202000757">10.26508/lsa.202000757</a>, <a href="https://www.life-science-alliance.org/content/3/11/e202000757">https://www.life-science-alliance.org/content/3/11/e202000757</a>.
</p>
<pre>@Article{,
title = {{multicrispr}: gRNA design for prime editing and parallel targeting of thousands of targets},
author = {Aditya Bhagwat M and Johannes Graumann and Rene Wiegandt and Mette Bentsen and Jordan Welker and Jordan Welker and Karsten Cuenne and Jens Preussner and Thomas Braun and Mario Looso},
journal = {Life Science Alliance},
year = {2020},
volume = {3},
number = {11},
url = {https://www.life-science-alliance.org/content/3/11/e202000757},
doi = {10.26508/lsa.202000757},
}</pre>
<div class="page-header">
<h1>Authors</h1>
</div>
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......@@ -35,7 +35,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......@@ -81,6 +81,9 @@
</header><div class="row">
<div class="contents col-md-9">
<div id="multicrispr-grna-design" class="section level1">
<div class="page-header"><h1 class="hasAnchor">
<a href="#multicrispr-grna-design" class="anchor"></a>multicrispr: gRNA design</h1></div>
<div id="installation" class="section level3">
<h3 class="hasAnchor">
......@@ -104,7 +107,7 @@
<a href="#overview" class="anchor"></a>Overview</h3>
<p><img src="https://gitlab.gwdg.de/loosolab/software/multicrispr/-/wikis/uploads/cdf31586bcf776a7a40acaaaf5172e10/overview.png"></p>
</div>
</div>
</div>
<div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar">
......@@ -123,6 +126,12 @@
<li><a href="https://www.r-project.org/Licenses/GPL-2">GPL-2</a></li>
</ul>
</div>
<div class="citation">
<h2>Citation</h2>
<ul class="list-unstyled">
<li><a href="authors.html">Citing multicrispr</a></li>
</ul>
</div>
<div class="developers">
<h2>Developers</h2>
<ul class="list-unstyled">
......@@ -131,7 +140,16 @@
</ul>
</div>
</div>
<div class="dev-status">
<h2>Dev status</h2>
<ul class="list-unstyled">
<li><a href="http://bioconductor.org/checkResults/devel/bioc-LATEST/multicrispr/"><img src="https://bioconductor.org/shields/build/devel/bioc/multicrispr.svg"></a></li>
<li><a href="https://bioconductor.org/packages/devel/bioc/html/multicrispr.html#archives"><img src="https://bioconductor.org/shields/availability/3.12/multicrispr.svg"></a></li>
<li><a href="https://bioconductor.org/packages/devel/bioc/html/multicrispr.html#since"><img src="https://bioconductor.org/shields/years-in-bioc/multicrispr.svg"></a></li>
<li><a href="https://doi.org/10.26508/lsa.202000757"><img src="https://img.shields.io/badge/doi-10.26508/lsa.202000757-blue.svg"></a></li>
</ul>
</div>
</div>
</div>
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......@@ -5,5 +5,5 @@ articles:
crispr_grna_design: crispr_grna_design.html
genome_arithmetics: genome_arithmetics.html
prime_editing: prime_editing.html
last_built: 2020-09-06T20:38Z
last_built: 2020-09-10T14:12Z
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
......
......@@ -72,7 +72,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">multicrispr</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.24</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.99.26</span>
</span>
</div>
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