Readthedocs code examples
Add example calls to plotting functions, which will be displayed on the readthedocs website.
Please add your name to the function you are working on :)
Functions without example (feel free to add if something is missing):
-
plot_pca_variance -
search_clustering_parameters -
plot_group_embeddings -
compare_embeddings -
plot_3d_UMAP -
group_expression_boxplot -
group_correlation -
violinplot -
qc_violins -
boxplot -
grouped_violin -
clustermap_dotplot -
marker_gene_clustering
found in sctoolbox/plotting.py
Once you selected a function, create a branch & merge request and name it accordingly to your function (e.g. boxplot_doc_example). Create branch & merge request by clicking the arrow on the Create merge request button. Note: set source to dev
Edited by Micha-Frederick Kessler