sctoolbox.tools.marker_genes.get_rank_genes_tables - top x genes parameter
It would be nice to have a top_x
parameter in the get_rank_genes_tables
function. At the moment it will return a ranked table of all genes for each of the given groups. Saveing this creates huge excel files. Since I'm usually asked to provide the top 100-200 marker genes the default should be 200.