latest anndata version 0.12 does not allow forward slashes in column names or keys in uns
In proportion analysis notebook we save a dictionary with keys as cluster/celltype in .uns
and I got an Error when saving the anndata as .h5ad
:
ValueError: Forward slashes are not allowed in keys. Error raised while writing key 'vSM/PC' of <class 'h5py._hl.group.Group'> to /uns/scanpro/significance
Apparently it's not allowed to have forward slashes /
in keys in .uns
or in .obs
/.var
column names.