Added connection check for remote services to gitlab cicd. Bugfix to...

Added connection check for remote services to gitlab cicd. Bugfix to test_receive due to missing datetime function in python 3.6
Signed-off-by: Marcel Parciak <marcel.parciak@gmail.com>

.gitlab-ci.yml

@@ -9,7 +9,7 @@ variables:
   CDSTAR_VAULT: "medic"
   COUCH_URI: "https://c109-199.cloud.gwdg.de:5984"
   COUCH_USER: "annotation_agent_test"
-  couch_pass: "aXu9vcAugzQFvZij0TQOfnnN"
+  COUCH_PASS: "aXu9vcAugzQFvZij0TQOfnnN"
   COUCH_DB: "annotation_test"
 
 build_image:
@@ -33,6 +33,8 @@ run_tests:
     - umg
 
   before_script:
+    - curl --connect-timeout 5 $CDSTAR_URI
+    - curl --connect-timeout 5 $COUCH_URI
     - python3 -m pip install --upgrade pip
     - python3 -m pip install -r requirements.txt
 

annotator/test_receive.py

@@ -166,10 +166,10 @@ def test_receive_02(cdstar_archive):
     assert meta_json["identifier"] == archive_id
     assert datetime.datetime.strptime(
         cdstar_json["created"], "%Y-%m-%dT%H:%M:%S.%f%z"
-    ) == datetime.datetime.fromisoformat(meta_json["dateCreated"])
+    ) == datetime.datetime.strptime(meta_json["dateCreated"], "%Y-%m-%dT%H:%M:%S.%f")
     assert datetime.datetime.strptime(
         cdstar_json["modified"], "%Y-%m-%dT%H:%M:%S.%f%z"
-    ) == datetime.datetime.fromisoformat(meta_json["dateModified"])
+    ) == datetime.datetime.strptime(meta_json["dateModified"], "%Y-%m-%dT%H:%M:%S.%f")
     assert int(cdstar_json["file_count"]) == int(meta_json["size"]["value"])
     assert int(cdstar_json["file_count"]) == len(meta_json["hasPart"])