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MPI-Dortmund
sphire
eman2mirror
Commits
ad21d0fd
Commit
ad21d0fd
authored
Jun 15, 2022
by
sludtke42
Browse files
trivial fix for -f option on class averaging
parent
6e63f8c6
Changes
1
Hide whitespace changes
Inline
Side-by-side
programs/e2tiltvalidate.py
View file @
ad21d0fd
...
...
@@ -196,13 +196,13 @@ def main():
cdb
.
close
()
# Make simmx
e2simmxcmd
=
"e2simmx.py %s/projections_00.hdf %s %s/simmx.hdf
-f
--saveali --cmp=%s --align=%s --aligncmp=%s --verbose=%d"
%
(
options
.
path
,
options
.
untiltdata
,
options
.
path
,
options
.
simcmp
,
options
.
simalign
,
options
.
simaligncmp
,
options
.
verbose
)
e2simmxcmd
=
"e2simmx.py %s/projections_00.hdf %s %s/simmx.hdf --saveali --cmp=%s --align=%s --aligncmp=%s --verbose=%d"
%
(
options
.
path
,
options
.
untiltdata
,
options
.
path
,
options
.
simcmp
,
options
.
simalign
,
options
.
simaligncmp
,
options
.
verbose
)
if
options
.
simralign
:
e2simmxcmd
+=
" --ralign=%s --raligncmp=%s"
%
(
options
.
simralign
,
options
.
simraligncmp
)
if
options
.
parallel
:
e2simmxcmd
+=
" --parallel=%s"
%
options
.
parallel
if
options
.
shrink
:
e2simmxcmd
+=
" --shrink=%d"
%
options
.
shrink
run
(
e2simmxcmd
)
e2simmxcmd
=
"e2simmx.py %s/projections_00.hdf %s %s/simmx_tilt.hdf
-f
--saveali --cmp=%s --align=%s --aligncmp=%s --verbose=%d"
%
(
options
.
path
,
options
.
tiltdata
,
options
.
path
,
options
.
simcmp
,
options
.
simalign
,
options
.
simaligncmp
,
options
.
verbose
)
e2simmxcmd
=
"e2simmx.py %s/projections_00.hdf %s %s/simmx_tilt.hdf --saveali --cmp=%s --align=%s --aligncmp=%s --verbose=%d"
%
(
options
.
path
,
options
.
tiltdata
,
options
.
path
,
options
.
simcmp
,
options
.
simalign
,
options
.
simaligncmp
,
options
.
verbose
)
if
options
.
simralign
:
e2simmxcmd
+=
" --ralign=%s --raligncmp=%s"
%
(
options
.
simralign
,
options
.
simraligncmp
)
if
options
.
parallel
:
e2simmxcmd
+=
" --parallel=%s"
%
options
.
parallel
if
options
.
shrink
:
e2simmxcmd
+=
" --shrink=%d"
%
options
.
shrink
...
...
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