remove old notes

proxtoolbox/Problems/OrbitalTomog/planar_molecule/coronene_config.py

@@ -58,32 +58,8 @@ new_config = {
     # Algorithm:
     'algorithm': 'DRl',  # used to be 'Projection',
     'numruns': 1,  # the only time this parameter will
-    # be different than 1 is when we are
-    # benchmarking...not something a normal user
-    # would be doing.
-
-    # # The following are parameters specific to RAAR, HPR, and HAAR that the
-    # # user should be able to set/modify.  Surely
-    # # there will be other algorithm specific parameters that a user might
-    # # want to play with.  Don't know how best
-    # # to do this.  Thinking of a GUI interface, we could hard code all the
-    # #  parameters the user might encounter and have the menu options change
-    # # depending on the value of the 'method field.
-    # # do different things depending on the chosen algorithm:
-    # if(strcmp('method,'RAAR')||strcmp('method,'AP')||...
-    #        strcmp('method,'HPR')||strcmp('method,'HAAR'))
-    # the following just points this driver to a patch that communicates 
-    # the parameters defined at this level to the structures used in the 
-    # algorithms developed by Russell.  
-    # 'problem_family' : 'Phase',
-    # else # moreregularization parameters for Thorsten's algorithms:
-    #   prbl' : complete_itreg_par(prbl),
-    # This is just a patch to Thorsten's tools.  May want to change this
-    # later
-    # 'problem_family='Hohage',
-    # end
-
-    # if(strcmp('problem_family,'Phase'))
+    # be different than 1 is when we are benchmarking... not something a normal user would be doing.
+
     # maximum number of iterations and tolerances
     'MAXIT': 500,
     'TOL': 1e-10,
@@ -107,39 +83,12 @@ new_config = {
     # need to discuss how/whether the user should
     # put in information about the noise
     'data_ball': .999826,
-    # 'data_ball' : .9998261e-0,
-    # the above is the percentage of the gap
-    # between the measured data and the
-    # initial guess satisfying the
-    # qualitative constraints.  For a number 
-    # very close to one, the gap is not expected 
-    # to improve much.  For a number closer to 0
-    # the gap is expected to improve a lot.  
-    # Ultimately the size of the gap depends
-    # on the inconsistency of the measurement model 
-    # with the qualitative constraints.
-    # elseif(strcmp('problem_family,'Hohage'))
-    #    'alpha0' : 1e4,
-    #    'N_CG' : 70,
-    # end
+    # the above is the percentage of the gap between the measured data and the
+    # initial guess satisfying the qualitative constraints. For a number
+    # very close to one, the gap is not expected to improve much. For a number closer to 0
+    # the gap is expected to improve a lot. Ultimately the size of the gap depends
+    # on the inconsistency of the measurement model with the qualitative constraints.
 
-    # # ==========================================
-    # # parameters for plotting and diagnostics
-    # # ==========================================
-    # 'plotWhat.n1=2,
-    # 'plotWhat.n2=3,
-    # 'plotWhat.plots' : 'PYWpyw',
-    # 'verbose' : 1, # options are 0 or 1
-    # 'graphics' : 1, # whether or not to display figures, options are 0 or 1.
-    #                    # default is 1.
-    # 'anim' : 1,  # whether or not to disaply ``real time" reconstructions
-    #                 # options are 0=no, 1=yes, 2=make a movie
-    #                 # default is 1.
-    # 'graphics_display' : [], # unless specified, a default
-    #                             # plotting subroutine will generate
-    #                             # the graphics.  Otherwise, the user
-    #                             # can write their own plotting subroutine
-    #
     # # ==========================================
     # # parameters for plotting and diagnostics
     # # ==========================================
@@ -157,10 +106,3 @@ new_config = {
 
 }
 
-# =====================================================================
-#  Technical/software specific parameters
-# =====================================================================
-# Given the parameter values above, the following technical/algorithmic
-# parameters are automatically set.  The user does not need to know
-# about these details, and so probably these parameters should be set in
-# a module one level below this one.