Merge requests · loosolab

Update file .gitlab-ci.yml

loosolab/software/metadata_whitelists!34 · created Mar 01, 2024 by Jasmin Walter
- Merged
updated Mar 01, 2024
Update 3 files

loosolab/software/metadata_whitelists!33 · created Mar 01, 2024 by Jasmin Walter add_signal
- Merged
updated Mar 01, 2024
Update 3 files

loosolab/software/metadata_whitelists!32 · created Feb 29, 2024 by Jasmin Walter add_signal
- Merged
updated Feb 29, 2024
Resolve "CI/CD overhaul"

loosolab/software/sc_framework!233 · created Feb 15, 2024 by Rene Wiegandt Version 0.6 to main dev
CI/CD High Priority
- Merged
- 22
updated Feb 29, 2024
Resolve "revise LSI to use highly variable features"

loosolab/software/sc_framework!241 · created Feb 26, 2024 by Jan Detleffsen Version 0.5 to main dev
Feature request
- Merged
- 12
- Approved
updated Feb 29, 2024
Update department

loosolab/software/metadata_whitelists!31 · created Feb 28, 2024 by Jasmin Walter
- Merged
updated Feb 28, 2024
Resolve "Readthedocs code examples Clustering Re-clustering"

loosolab/software/sc_framework!206 · created Dec 06, 2023 by Sweta Talyan 140-readthedocs-code-examples-ii
Feature request Hackathon
- Merged
- 3
- Approved
updated Feb 26, 2024
Issue 140 hackathon vanessa plot venn

loosolab/software/sc_framework!204 · created Dec 06, 2023 by Vanessa Heger 140-readthedocs-code-examples-ii
Hackathon
- Merged
- 3
- Approved
updated Feb 26, 2024
140 hackathon fatemeh

loosolab/software/sc_framework!208 · created Dec 06, 2023 by Fatemeh Khassafi 140-readthedocs-code-examples-ii
Hackathon
- Merged
- 2
- Approved
updated Feb 26, 2024
connectionPlot enhancement

loosolab/software/sc_framework!235 · created Feb 15, 2024 by Hendrik Schultheis dev
- Merged
- 3
- Approved
updated Feb 23, 2024
Resolve "refactor annotate_genes() into 04_clustering from 05_annotation"

loosolab/software/sc_framework!218 · created Jan 22, 2024 by Jan Detleffsen Version 0.5 to main dev
ATAC
- Merged
- 3
- Approved
updated Feb 22, 2024
YAML notebook, guided search updates

loosolab/software/annotate_by_marker_and_features!52 · created Feb 22, 2024 by Micha-Frederick Kessler
- Merged
updated Feb 22, 2024
Resolve "Notebook3: Add ribo/mito count to batch correction plot"

loosolab/software/sc_framework!239 · created Feb 19, 2024 by Hendrik Schultheis Version 0.5 to main dev
Feature request
- Merged
- 1
- Approved
updated Feb 21, 2024
Resolve "01_Assembly notebook"

loosolab/software/sc_framework!236 · created Feb 16, 2024 by Hendrik Schultheis dev
RNA
- Merged
- Approved
updated Feb 21, 2024
Resolve "Marker Repo integration"

loosolab/software/sc_framework!194 · created Nov 13, 2023 by Micha-Frederick Kessler dev
Celltype annotation Feature request
- Merged
- 7
- Approved
updated Feb 20, 2024
Add CI/CD container build pipeline for testing

loosolab/software/sc_framework!172 · created Aug 20, 2023 by Jan Detleffsen Version 0.3 to main dev
CI/CD
- Merged
- 25
- Approved
updated Feb 20, 2024
Readme

loosolab/software/sc_framework!229 · created Feb 15, 2024 by Hendrik Schultheis dev
- Merged
- 19
- Approved
updated Feb 19, 2024
Test CI MR

loosolab/software/sc_framework!237 · created Feb 16, 2024 by Rene Wiegandt dev-test
CI/CD High Priority
- Merged
updated Feb 16, 2024
Convert to adata fix

loosolab/software/sc_framework!227 · created Feb 13, 2024 by Hendrik Schultheis dev
- Merged
- 4
- Approved
updated Feb 16, 2024
Resolve "fa2 installation fails"

loosolab/software/sc_framework!231 · created Feb 15, 2024 by Hendrik Schultheis dev
Bug Dependency issue Discussion High Priority
- Merged
- Approved
updated Feb 15, 2024