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<p class="section-desc"><p>These articels give an overview over the core functions of <strong>i2dash</strong></p></p>
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<p>Ustjanzew A., Preussner J., Bentsen M., Kuenne C., and Looso M. i2dash: creation of flexible, interactive and web-based dashboards from data analysis pipelines. tba URL tba</p>
<pre>@Article{,
title = {i2dash: creation of flexible, interactive and web-based dashboards from data analysis pipelines},
author = {Arsenij Ustjanzew and Jens Preussner and Mette Bentsen and Carsten Kuenne and Mario Looso},
journal = {tba},
year = {2020},
volume = {40},
number = {3},
pages = {1--25},
url = {tba},
}</pre>
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<h1>Authors</h1>
</div>
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</p>
</li>
<li>
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float: none;
padding-top: 0
}
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float: none;
width: auto;
padding: 0;
text-align: left
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float: none;
width: auto;
padding: 0
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.algolia-autocomplete .algolia-docsearch-suggestion--content::before {
display: none
}
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padding-top: .75rem;
margin-top: .75rem;
border-top: 1px solid rgba(0, 0, 0, .1)
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display: block;
padding: .1rem 1rem;
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font-weight: 400
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margin-top: 10.66667px;
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color: #FF8C00;
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box-shadow: inset 0 -2px 0 0 rgba(105, 105, 105, .5)
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background-color: rgba(192, 192, 192, .15)
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docs/docsearch.js 0 → 100644
View file @ a3db7236
$(function() {
// register a handler to move the focus to the search bar
// upon pressing shift + "/" (i.e. "?")
$(document).on('keydown', function(e) {
if (e.shiftKey && e.keyCode == 191) {
e.preventDefault();
$("#search-input").focus();
}
});
$(document).ready(function() {
// do keyword highlighting
/* modified from https://jsfiddle.net/julmot/bL6bb5oo/ */
var mark = function() {
var referrer = document.URL ;
var paramKey = "q" ;
if (referrer.indexOf("?") !== -1) {
var qs = referrer.substr(referrer.indexOf('?') + 1);
var qs_noanchor = qs.split('#')[0];
var qsa = qs_noanchor.split('&');
var keyword = "";
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continue;
}
if (currentParam[0] == paramKey) {
keyword = decodeURIComponent(currentParam[1].replace(/\+/g, "%20"));
}
}
if (keyword !== "") {
$(".contents").unmark({
done: function() {
$(".contents").mark(keyword);
}
});
}
}
};
mark();
});
});
/* Search term highlighting ------------------------------*/
function matchedWords(hit) {
var words = [];
var hierarchy = hit._highlightResult.hierarchy;
// loop to fetch from lvl0, lvl1, etc.
for (var idx in hierarchy) {
words = words.concat(hierarchy[idx].matchedWords);
}
var content = hit._highlightResult.content;
if (content) {
words = words.concat(content.matchedWords);
}
// return unique words
var words_uniq = [...new Set(words)];
return words_uniq;
}
function updateHitURL(hit) {
var words = matchedWords(hit);
var url = "";
if (hit.anchor) {
url = hit.url_without_anchor + '?q=' + escape(words.join(" ")) + '#' + hit.anchor;
} else {
url = hit.url + '?q=' + escape(words.join(" "));
}
return url;
}
docs/favicon-16x16.png 0 → 100644
View file @ a3db7236
docs/favicon-16x16.png

1.41 KiB

docs/favicon-32x32.png 0 → 100644
View file @ a3db7236
docs/favicon-32x32.png

2.71 KiB

docs/favicon-96x96.png 0 → 100644
View file @ a3db7236
docs/favicon-96x96.png

7.52 KiB

docs/favicon.ico 0 → 100644
View file @ a3db7236
docs/favicon.ico

1.12 KiB

docs/index.html 0 → 100644
View file @ a3db7236
<!DOCTYPE html>
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<div id="interactive-iterative-dashboards-in-r" class="section level1">
<div class="page-header"><h1 class="hasAnchor">
<a href="#interactive-iterative-dashboards-in-r" class="anchor"></a>Interactive &amp; iterative dashboards in R</h1></div>
<div id="abstract" class="section level2">
<h2 class="hasAnchor">
<a href="#abstract" class="anchor"></a>Abstract <img src="articles/images/i2dash_logo.png" align="right" width="150px">
</h2>
<p>Scientific communication and data visualization are important aspects to illustrate complex concepts and results from data analyses. The R package <strong>i2dash</strong> provides functionality to create customized, web-based dashboards for data presentation, exploration and sharing. <strong>i2dash</strong> integrates easily into existing data analysis pipelines and can organize scientific findings thematically across different pages and layouts.</p>
<div id="main-features" class="section level3">
<h3 class="hasAnchor">
<a href="#main-features" class="anchor"></a>Main features</h3>
<ul>
<li>Easy integration into existing analysis pipelines in R for programmatic dashboard creation</li>
<li>Provides a selection of predefined layouts to arrange content</li>
<li>Support for multiple components, such as htmlwidgets, tables, text, images etc.</li>
<li>Creation of web-based, sharable, static or interactive dashboards</li>
<li>Enables a flexible and iterative cycle of dashboard development</li>
</ul>
</div>
</div>
<div id="installation" class="section level2">
<h2 class="hasAnchor">
<a href="#installation" class="anchor"></a>Installation</h2>
<p>The package can be installed with:</p>
<pre><code><a href="https://rdrr.io/r/utils/install.packages.html">install.packages("i2dash")</a></code></pre>
</div>
<div id="extension" class="section level2">
<h2 class="hasAnchor">
<a href="#extension" class="anchor"></a>Extension</h2>
<p>It is possible to extend the core functionality of <strong>i2dash</strong> with templates for components and pre-defined pages. This enables to provide an enhanced user interactivity e.g. dynamic change of plot settings. Further, extensions allow an easier integration of complex calculations and data manipulation, hidden behind functions.</p>
<ul>
<li>
<a href="https://gitlab.gwdg.de/loosolab/software/i2dash.scrnaseq"><strong>i2dash.scrnaseq</strong></a> enables an enhanced user interactivity and contains simple but effective tools for the creation of an i2dashboard with focus on single-cell RNA-sequencing data visualization and exploration.</li>
</ul>
</div>
</div>
</div>
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<div class="links">
<h2>Links</h2>
<ul class="list-unstyled">
<li>Visit our webpage at <br><a href="https://loosolab.mpi-bn.mpg.de">https://​loosolab.mpi-bn.mpg.de</a>
</li>
</ul>
</div>
<div class="license">
<h2>License</h2>
<ul class="list-unstyled">
<li>
<a href="https://opensource.org/licenses/mit-license.php">MIT</a> + file <a href="LICENSE-text.html">LICENSE</a>
</li>
</ul>
</div>
<div class="citation">
<h2>Citation</h2>
<ul class="list-unstyled">
<li><a href="authors.html">Citing i2dash</a></li>
</ul>
</div>
<div class="developers">
<h2>Developers</h2>
<ul class="list-unstyled">
<li>Arsenij Ustjanzew <br><small class="roles"> Author, maintainer </small> </li>
<li>Jens Preussner <br><small class="roles"> Author </small> <a href="https://orcid.org/0000-0003-1927-3458" target="orcid.widget" aria-label="ORCID"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a> </li>
<li>Mario Looso <br><small class="roles"> Author </small> <a href="https://orcid.org/0000-0003-1495-9530" target="orcid.widget" aria-label="ORCID"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a> </li>
</ul>
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<p>Developed by Arsenij Ustjanzew, Jens Preussner, Mario Looso.</p>
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<p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.5.1.</p>
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