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Commit 7b8a8722 authored by Kristian Ullrich's avatar Kristian Ullrich
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# try to fix

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...@@ -2,7 +2,7 @@ image: rocker/r-ver:4.4.2 ...@@ -2,7 +2,7 @@ image: rocker/r-ver:4.4.2
before_script: before_script:
- apt-get update - apt-get update
- apt-get -y install libfontconfig1-dev libssl-dev libxml2-dev pandoc libcurl4-openssl-dev r-cran-rcpp r-cran-devtools r-cran-testthat r-cran-curl r-cran-seqinr r-cran-ape r-bioc-biostrings r-cran-uuid r-cran-callr r-cran-rmarkdown r-bioc-biocstyle - apt-get -y install libfontconfig1-dev libssl-dev libxml2-dev libharfbuzz-dev libfribidi-dev pandoc libcurl4-openssl-dev r-cran-rcpp r-cran-devtools r-cran-testthat r-cran-curl r-cran-seqinr r-cran-ape r-bioc-biostrings r-cran-uuid r-cran-callr r-cran-rmarkdown r-bioc-biocstyle
- R -e "install.packages('BiocManager'); BiocManager::install(version = '3.20')" - R -e "install.packages('BiocManager'); BiocManager::install(version = '3.20')"
- R -e "dir(); getwd(); sessionInfo(); install.packages('tidyverse', repos='http://cran.rstudio.com'); install.packages('pkgdown', repos='http://cran.rstudio.com'); install.packages('RcppThread', repos='http://cran.rstudio.com'); Rcpp::compileAttributes(); devtools::install(); update.packages(ask = FALSE, checkBuilt = TRUE)" - R -e "dir(); getwd(); sessionInfo(); install.packages('tidyverse', repos='http://cran.rstudio.com'); install.packages('pkgdown', repos='http://cran.rstudio.com'); install.packages('RcppThread', repos='http://cran.rstudio.com'); Rcpp::compileAttributes(); devtools::install(); update.packages(ask = FALSE, checkBuilt = TRUE)"
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