tests.py

import os
import pytest
import importlib
import subprocess
import time
import shutil
from pathlib import Path

mod = importlib.import_module("mpsd-software-environment")


def test_os_chdir(tmp_path):
    # create a temporary directory for testing
    temp_dir = tmp_path / "test_os_chdir"
    temp_dir.mkdir()

    # initial current working directory
    initial_cwd = os.getcwd()

    # change to the temporary directory using os_chdir
    with mod.os_chdir(str(temp_dir)):
        assert os.getcwd() == str(temp_dir)

    # current working directory should be back to initial directory
    assert os.getcwd() == initial_cwd


def test_prepare_environment(tmp_path):
    # simulate running ./install-software-environment.py --release dev-23a --target-directory /tmp/test_prepare_env
    # prepare_env is run when cmd is not specified, we can test cmd='prepare'  and cmd=None to check both cases

    script_dir = tmp_path / "test_prepare_env"
    spack_environments = "spack-environments"
    mpsd_release_to_test = "dev-23a"
    release_base_dir = script_dir / mpsd_release_to_test
    # check that the test directory does not exist
    assert not script_dir.exists()

    result = mod.prepare_environment(
        mpsd_release=mpsd_release_to_test, script_dir=(script_dir)
    )
    # wait for 20 seconds for the git clone to finish
    # time.sleep(20)
    # check if the directory now is created
    assert release_base_dir.exists()
    # check for spack-environments directory
    assert spack_environments in os.listdir(release_base_dir)
    # check if the git branch is correctly checked out
    assert (
        subprocess.run(
            f"cd {str(release_base_dir/spack_environments)} && git branch",
            shell=True,
            capture_output=True,
        )
        .stdout.decode("utf-8")
        .split("\n")[0]
        == f"* {mpsd_release_to_test}"
    )
    # check that result is a list and contains atleast ['global','foss2021a-mpi']
    assert isinstance(result, list)
    assert "global" in result
    assert "foss2021a-mpi" in result

    # Expect an Exception when wrong mpsd_release is provided
    with pytest.raises(Exception):
        result = mod.prepare_environment(
            mpsd_release="wrong-mpsd-release", script_dir=(script_dir)
        )


def test_setup_log_cmd(tmp_path):
    # check that logs/install-software-environment.log is updated when the module is run
    log_file = "install.log"

    script_dir = tmp_path / "test_prepare_env"
    spack_environments = "spack-environments"
    mpsd_release_to_test = "dev-23a"
    release_base_dir = script_dir / mpsd_release_to_test
    if os.path.exists(release_base_dir / log_file):
        initial_bytes = os.path.getsize(log_file)
    else:
        initial_bytes = 0

    # run the prepare_env functionality
    result = mod.prepare_environment(
        mpsd_release=mpsd_release_to_test, script_dir=(script_dir)
    )

    # check that logs/install-software-environment.log is updated
    assert os.path.exists(release_base_dir / log_file)
    assert os.path.getsize(release_base_dir / log_file) > initial_bytes

    # Check that the log file has "Spack environments branch: dev-23a " in the last line
    with open(release_base_dir / log_file, "r") as f:
        last_line = f.readlines()[-1]
        assert "Spack environments branch: dev-23a " in last_line


def test_install_environment(tmp_path):
    # Test the installation part
    # This is a long test, its handy to test this with print statements printed to stdout, use:
    #   pytest -s
    # Expect an Exception when wrong toolchains are provided
    with pytest.raises(Exception):
        mod.install_environment(
            mpsd_release="dev-23a",
            toolchains=["wrong-toolchain"],
            script_dir=(tmp_path),
        )
    # Expect an Exception when wrong mpsd_release is provided ( part of prepare_environment)
    with pytest.raises(Exception):
        mod.install_environment(
            mpsd_release="wrong-mpsd-release",
            toolchains=["foss2021a-mpi"],
            script_dir=(tmp_path),
        )
    # prepare a test of global generic with only zlib to test the installation
    # prepare dev-23a release
    # script_dir = tmp_path / "test_global_generic"
    # for actaual installation avoid tmp_path as the lenght of the path is too long and spack complains
    script_dir = Path("/tmp/test_global_generic")
    if script_dir.exists():
        shutil.rmtree(script_dir)
    script_dir.mkdir(exist_ok=True, parents=True)
    spack_environments = "spack-environments"
    mpsd_release_to_test = "dev-23a"
    toolchain_to_test = "global_generic"
    mpsd_microarch = os.getenv("MPSD_MICROARCH", "UNKNOWN_MICROARCH")
    release_base_dir = script_dir / mpsd_release_to_test
    prepare_result = mod.prepare_environment(
        mpsd_release=mpsd_release_to_test, script_dir=(script_dir)
    )
    # Patch the spack environments to create a fake global_generic
    # create a test toolchain
    toolchain_src_dir = release_base_dir / "spack-environments" / "toolchains"
    # with mod.os_chdir(toolchain_src_dir):
    #     subprocess.run(
    #         "cp -r foss2021a-mpi fuss1999a", shell=True, capture_output=True
    #     )
    # add zlib as a spec to global_generic
    with open(toolchain_src_dir / "global_generic" / "global_packages.list", "w") as f:
        f.write("zlib@1.2.13 \n")

    # add zlib to whitelist of module creation file by replacing anaconda3%gcc@10.2.1 with zlib@1.2.13
    # in release_base_dir / "spack-environments/spack_overlay/etc/spack/modules.yaml"
    module_file = (
        release_base_dir / "spack-environments/spack_overlay/etc/spack/modules.yaml"
    )
    with open(module_file, "r") as f:
        lines = f.read().replace("anaconda3%gcc@10.2.1", "zlib@1.2.13")
    with open(module_file, "w") as f:
        f.write(lines)

    # Replace gcc@10.2.1 with gcc#13.1.1 or available system gcc for testing on laptop
    gcc_ver = (
        subprocess.run(["gcc -dumpfullversion"], shell=True, capture_output=True)
        .stdout.decode("utf-8")
        .strip()
    )
    setup_file = release_base_dir / "spack-environments/spack_setup.sh"
    with open(setup_file, "r") as f:
        lines = f.read().replace(
            'system_compiler="gcc@10.2.1"', f'system_compiler="gcc@{gcc_ver}"'
        )
    with open(setup_file, "w") as f:
        f.write(lines)
    # install global_generic toolchain
    install_result = mod.install_environment(
        mpsd_release=mpsd_release_to_test,
        toolchains=[toolchain_to_test],
        script_dir=script_dir,
        enable_build_cache=False,
    )
    # test that the build log is created correctly
    # check that a file with glob build_globale_generic_dev-23a*.log exists at release_base_dir/mpsd_microarch
    # print("Debug here ")
    # time.sleep(10)
    build_log = list(
        (release_base_dir / mpsd_microarch / "logs").glob(
            f"{mpsd_release_to_test}_{toolchain_to_test}_*.log"
        )
    )
    assert len(build_log) > 0
    # take the most recent build log
    build_log = sorted(build_log)[0]
    # check that the build log contains statement ##### Installation finished
    with open(build_log, "r") as f:
        lines = f.read()
        assert "##### Installation finished" in lines

    # assert that install log files exists
    assert os.path.exists(release_base_dir / "install.log")

    # assert that the build log is written to the install log file
    build_log_file_name = os.path.basename(build_log)
    with open(release_base_dir / "install.log", "r") as f:
        lines = f.read()
        assert (
            "installing {toolchain_to_test} and logging at logs/{build_log_file_name}"
            in lines
        )
    # assert that the module files are created correctly
    assert os.path.exists(release_base_dir / mpsd_microarch)
    assert os.path.exists(release_base_dir / mpsd_microarch / "lmod")
    # assert that lmod/module-index.yaml contains zlib
    with open(
        release_base_dir / mpsd_microarch / "lmod" / "module-index.yaml", "r"
    ) as f:
        lines = f.read()
        assert "zlib" in lines


def test_interface(tmp_path):
    pass
    # ensure that installing without toolchains only passes the available toolchains
    # check that the script branch and hash are correct when running the script
    # check that the help message is printed when no arguments are provided
    # check that the help message is printed when -h is provided
    # check that the error messages are also logged to the log file