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loosolab
software
multicrispr
Commits
8cc4d37e
Commit
8cc4d37e
authored
Oct 16, 2020
by
aditya.bhagwat
Browse files
Fix add_genome_matches
parent
7378c8d1
Pipeline
#154777
passed with stages
in 51 seconds
Changes
2
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1
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DESCRIPTION
View file @
8cc4d37e
Package: multicrispr
Title: Multi-locus multi-purpose Crispr/Cas design
Version: 0.99.3
3
Version: 0.99.3
4
Encoding: UTF-8
Authors@R: c(person("Aditya", "Bhagwat", NULL, "aditya.bhagwat@mpi-bn.mpg.de", c("aut", "cre")),
person( "Johannes", "Graumann", NULL, 'johannes.graumann@mpi-bn.mpg.de',c("sad", "ctb")),
...
...
R/07_count_offtargets.R
View file @
8cc4d37e
...
...
@@ -594,6 +594,7 @@ add_genome_matches <- function(
verbose
=
TRUE
){
assert_is_subset
(
offtargetmethod
,
c
(
'bowtie'
,
'pdict'
))
if
(
!
has_been_indexed
(
bsgenome
,
indexedgenomesdir
))
return
(
spacers
)
if
(
offtargetmethod
==
'bowtie'
){
add_genome_matches_bowtie
(
spacers
=
spacers
,
bsgenome
=
bsgenome
,
mismatches
=
mismatches
,
...
...
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